Workbench Command is a set of command-line tools that can be used to perform simple and complex operations within Connectome Workbench.
ADD OR REMOVE FILES FROM SPEC FILE wb_command -spec-file-modify <spec-file> - the spec file to modify [-add] - repeatable - add a file to the spec <structure> - the structure of the data file <file> - the file to add [-remove] - repeatable - remove a file from the spec file <filename> - the filename to remove [-recursive] - remove all files that match the string starting from any folder [-suffix] - match any file that ends with the given string (if there are multiple matches, error unless -recursive was also specified) The input spec file is overwritten with the new version. If the spec file does not exist, it is created with default metadata. Removals are done before additions, so that you can remove files with a pattern, and then add new files even if they match that removal pattern. The <structure> argument of -add must match one of the following strings (you can use INVALID for cifti or volume files):CORTEX_LEFT CORTEX_RIGHT CEREBELLUM ACCUMBENS_LEFT ACCUMBENS_RIGHT ALL_GREY_MATTER ALL_WHITE_MATTER AMYGDALA_LEFT AMYGDALA_RIGHT BRAIN_STEM CAUDATE_LEFT CAUDATE_RIGHT CEREBELLAR_WHITE_MATTER_LEFT CEREBELLAR_WHITE_MATTER_RIGHT CEREBELLUM_LEFT CEREBELLUM_RIGHT CEREBRAL_WHITE_MATTER_LEFT CEREBRAL_WHITE_MATTER_RIGHT CORTEX DIENCEPHALON_VENTRAL_LEFT DIENCEPHALON_VENTRAL_RIGHT HIPPOCAMPUS_LEFT HIPPOCAMPUS_RIGHT HIPPOCAMPUS_DENTATE_LEFT HIPPOCAMPUS_DENTATE_RIGHT INVALID OTHER OTHER_GREY_MATTER OTHER_WHITE_MATTER PALLIDUM_LEFT PALLIDUM_RIGHT PUTAMEN_LEFT PUTAMEN_RIGHT THALAMUS_LEFT THALAMUS_RIGHT